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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1726167_1728330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1726167 - 1728330

Intron Length:

2164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

AACATTTAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTAAACA

Flanking Amino Acid:

LGIPVVCHLPGVGQNLQDHL

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

78.7

30.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

61.7

0.26

1.1

59.9

44.2

Minor 5ss

-0.7

2.8

55.4

Minor BPS

65.1

0.47

1.6

75.16

36.6

Associated Gene:

Gene:

CHDH

Ensembl Gene ID:

ENSAPLG00000013484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014038

1721301 - 1731535

10235