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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1728466_1729648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1728466 - 1729648

Intron Length:

1183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTACACTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCTCTCTCATT

Flanking Amino Acid:

IGLEWLWKFTGDGATAHLES

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

71.7

0.49

0.9

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

51.2

0.12

2.1

75.83

41.7

Associated Gene:

Gene:

CHDH

Ensembl Gene ID:

ENSAPLG00000013484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029655

1727271 - 1731439

4169

ENSAPLT00000014038

1721301 - 1731535

10235