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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1729792_1730479_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1729792 - 1730479

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGGCTATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

GTGTCATGAGCA

Flanking Amino Acid:

RVASTMEAYQVHVGPMRSTS

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

70.1

0.45

62.6

43.1

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

48.2

-0.1

62.79

42.8

Associated Gene:

Gene:

CHDH

Ensembl Gene ID:

ENSAPLG00000013484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029655

1727271 - 1731439

4169

ENSAPLT00000014038

1721301 - 1731535

10235