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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1730583_1731020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1730583 - 1731020

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTTTCCTTACAG

Flanking Amino Acid:

PIIEPNYMSTERDIWEFRQC

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

89.6

0.89

0.6

84.1

24.1

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

0.24

1.9

68.4

44.9

Associated Gene:

Gene:

CHDH

Ensembl Gene ID:

ENSAPLG00000013484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029655

1727271 - 1731439

4169

ENSAPLT00000014038

1721301 - 1731535

10235