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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17318529_17320739_F

Intron Information:

Intron Rank:

143444

Intron Class:

major

Intron Phase:

Intron Coordinates:

17318529 - 17320739

Intron Length:

2211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTGAA

5'SS Class:

major

3'SS Sequence:

TGCATCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

GTGTGTGCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

72.2

32.4

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

70.8

0.47

0.9

61.7

39.9

Minor 5ss

32.2

-2

3.1

37.2

42.5

Minor BPS

-0.9

2.4

56.16

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033274

17315055 - 17328028

12974

ENSAPLT00000044486

17315055 - 17327433

12379