Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_17369968_17370489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17369968 - 17370489

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGACTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

CTCTGCTGACTT

Flanking Amino Acid:

PQWAYGNWGECTKPCGAGTR

Intron Amino Acid Position:

1229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

72.9

0.52

62.3

43.5

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

45.7

-0.2

2.1

63.83

Associated Gene:

Gene:

ADAMTS9

Ensembl Gene ID:

ENSAPLG00000005973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006283

17329198 - 17404071

74874