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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17401817_17402248_F


Intron Information:

Intron Rank:
39

Intron Class:
major

Intron Phase:
3UTR

Intron Coordinates:
17401817 - 17402248

Intron Length:
432

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGTGCC

5'SS Class:
strong_major

3'SS Sequence:
CTGTGCTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAC

U12 Branch Point Sequence:
ATGGCCTGACTC

Flanking Amino Acid:
3UTR

Intron Amino Acid Position:
3UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.2
0.88
0.9
76
34.9

Major BPS
69.1
0.47
1
60.7
37.6

Major PPT
79.2
0.66
0.9
72.8
37.5

Minor 5ss
34.1
-1.8
3.1
41.9
38.9

Minor BPS
47.7
-0.2
1.8
57.14
42

Associated Gene:

Gene:
ADAMTS9

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17329198 - 17404071
74874