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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1744676_1748176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1744676 - 1748176

Intron Length:

3501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCCCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

ATTTTCCTAATG

Flanking Amino Acid:

RRRLLPPTPTPNRRSSFNFE

Intron Amino Acid Position:

1938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.4

0.53

0.9

67.1

35.4

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

63.1

0.27

1.7

70.09

37.3

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604