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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17483976_17494414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17483976 - 17494414

Intron Length:

10439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTCAC

U12 Branch Point Sequence:

TCACCGCCATCT

Flanking Amino Acid:

WVPPGLKPEQVHQYYSCLPE

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.1

81.5

32.7

Major BPS

47.8

-0.1

1.4

44.3

Major PPT

73.6

0.53

0.9

66.1

40.8

Minor 5ss

41.8

-0.9

3.2

58.1

46.5

Minor BPS

36.6

-0.9

2.4

55.43

45.9

Associated Gene:

Gene:

PRICKLE2

Ensembl Gene ID:

ENSAPLG00000003962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039430

17483652 - 17511629

27978

ENSAPLT00000004072

17482757 - 17511629

28873