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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17496741_17498316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17496741 - 17498316

Intron Length:

1576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAC

U12 Branch Point Sequence:

TCTGACTTAACT

Flanking Amino Acid:

LKPRCAACDEIIFADECTEA

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

68.3

0.45

69.6

32.8

Major PPT

76.6

0.6

0.9

68.5

42.1

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

71.2

0.74

1.6

84.76

41.8

Associated Gene:

Gene:

PRICKLE2

Ensembl Gene ID:

ENSAPLG00000003962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004072

17482757 - 17511629

28873

ENSAPLT00000039430

17483652 - 17511629

27978