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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17501606_17510760_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17501606 - 17510760

Intron Length:

9155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CTTCCCCCACCA

Flanking Amino Acid:

MESLALSNATGLSADGGAKR

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.5

39.1

Major BPS

78.8

0.71

67.6

40.6

Major PPT

58.7

0.2

56.8

32.8

Minor 5ss

33.4

-1.9

3.1

43.8

43.9

Minor BPS

45.4

-0.3

2.1

61.96

43.8

Associated Gene:

Gene:

PRICKLE2

Ensembl Gene ID:

ENSAPLG00000003962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039430

17483652 - 17511629

27978

ENSAPLT00000004072

17482757 - 17511629

28873