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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17534163_17535223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17534163 - 17535223

Intron Length:

1061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTTAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTCTCTTTTAAG

Flanking Amino Acid:

LITRNIEKAKSLIEEGGDWD

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

82.1

0.72

0.9

24.1

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

55.8

0.04

1.9

64.24

43.6

Associated Gene:

Gene:

PSMD6

Ensembl Gene ID:

ENSAPLG00000003464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003540

17532184 - 17538629

6446