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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1753438_1762973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1753438 - 1762973

Intron Length:

9536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTGATTGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTGTGATTGATT

Flanking Amino Acid:

PAKNTTIALQAGLRTLHDIG

Intron Amino Acid Position:

1665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

76.8

34.7

Major BPS

84.6

0.86

41.2

Major PPT

61.8

0.27

1.1

46.3

Minor 5ss

38.4

-1.3

2.9

49.3

46.9

Minor BPS

52.2

0.15

2.1

75.82

41.5

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604