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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17535646_17536762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17535646 - 17536762

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TAGAAATTGATT

Flanking Amino Acid:

CSYAAFFQSLAIVEQEMKKD

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

85.1

0.79

0.7

76.9

31.8

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

46.7

-0.1

1.8

62.94

Associated Gene:

Gene:

PSMD6

Ensembl Gene ID:

ENSAPLG00000003464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003540

17532184 - 17538629

6446