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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17536932_17538305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17536932 - 17538305

Intron Length:

1374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TCTCTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TATCATTCAACC

Flanking Amino Acid:

AFGVSVEFIDQELSRFIAAG

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

39.3

Major BPS

70.5

0.51

1.3

41.2

Major PPT

0.76

0.6

84.1

23.9

Minor 5ss

44.1

-0.6

2.9

63.9

41.5

Minor BPS

53.6

0.09

1.7

66.8

38.1

Associated Gene:

Gene:

PSMD6

Ensembl Gene ID:

ENSAPLG00000003464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003540

17532184 - 17538629

6446