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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17626503_17627688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17626503 - 17627688

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

AAATTTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TAACATTTAAAT

Flanking Amino Acid:

QAKRIRKNRQEYDALAKVIQ

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.9

41.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

78.1

0.63

0.9

74.5

40.2

Minor 5ss

33.4

-1.9

2.9

35.8

40.7

Minor BPS

0.23

1.6

70.43

39.5

Associated Gene:

Gene:

THOC7

Ensembl Gene ID:

ENSAPLG00000003317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003394

17624430 - 17632721

8292