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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17627747_17631273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17627747 - 17631273

Intron Length:

3527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AGAACTTTAAAA

Flanking Amino Acid:

QHHPDRHETLKQLEALGKEL

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

84.8

0.78

0.8

81.8

34.9

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

57.8

0.24

1.4

61.97

37.2

Associated Gene:

Gene:

THOC7

Ensembl Gene ID:

ENSAPLG00000003317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003394

17624430 - 17632721

8292