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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17693636_17760420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17693636 - 17760420

Intron Length:

66785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TCTTTTTTGACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCTTTTTTGACA

Flanking Amino Acid:

PLAFLRVLEWLFAIFAFATC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

65.8

40.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

85.2

0.79

0.9

83.2

31.9

Minor 5ss

29.6

-2.3

2.7

28.8

35.5

Minor BPS

73.1

0.72

1.1

77.15

33.9

Associated Gene:

Gene:

SYNPR

Ensembl Gene ID:

ENSAPLG00000003065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033508

17670690 - 17760949

90260