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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17787701_17793392_F

Intron Information:

Intron Rank:

145031

Intron Class:

major

Intron Phase:

Intron Coordinates:

17787701 - 17793392

Intron Length:

5692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCTGT

5'SS Class:

major

3'SS Sequence:

TTTTCTCTGCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAG

U12 Branch Point Sequence:

TGTGCATTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

70.9

41.9

Major BPS

55.5

0.14

1.5

65.3

38.6

Major PPT

82.5

0.73

0.9

77.4

36.9

Minor 5ss

41.9

-0.9

2.9

57.2

46.9

Minor BPS

56.9

0.3

77.89

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038818

17786910 - 17793886

6977