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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17924727_17926591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17924727 - 17926591

Intron Length:

1865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

TCTTCCACCACC

Flanking Amino Acid:

SDVVLSFSLEVVIMEVQGLK

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.3

32.2

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

80.5

0.69

0.8

73.8

31.3

Minor 5ss

48.4

-0.1

2.8

67.4

Minor BPS

48.4

-0.1

2.2

67.67

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023780

17854056 - 18049169

195114

ENSAPLT00000021873

17854056 - 18049169

195114

ENSAPLT00000002342

17854056 - 18049169

195114

ENSAPLT00000040013

17854056 - 18049169

195114