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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1794736_1796159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1794736 - 1796159

Intron Length:

1424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAAAATA

5'SS Class:

major

3'SS Sequence:

CTTGTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTTTTTACAG

Flanking Amino Acid:

YKNCELDKNQRQCVEYALKA

Intron Amino Acid Position:

1195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

75.3

34.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

88.6

0.87

0.7

83.2

31.9

Minor 5ss

32.8

-2

2.9

44.9

Minor BPS

51.1

-0.1

1.8

59.4

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604