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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17949163_17957303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17949163 - 17957303

Intron Length:

8141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGAT

5'SS Class:

major

3'SS Sequence:

TGATTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GCCATCTTAGCT

Flanking Amino Acid:

WKKRFFVLVQVSQYTFAMCS

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

75.1

35.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

80.9

0.69

0.9

78.1

36.2

Minor 5ss

37.6

-1.4

3.5

55.7

48.5

Minor BPS

52.5

0.16

1.7

64.79

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023780

17854056 - 18049169

195114

ENSAPLT00000021873

17854056 - 18049169

195114

ENSAPLT00000002342

17854056 - 18049169

195114

ENSAPLT00000040013

17854056 - 18049169

195114