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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1796362_1797146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1796362 - 1797146

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTGAA

5'SS Class:

major

3'SS Sequence:

CCCTCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCCC

U12 Branch Point Sequence:

TTCCCCTTCCTT

Flanking Amino Acid:

FTVSTFEGWPALLYKAIDSN

Intron Amino Acid Position:

1127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.3

64.6

37.4

Major BPS

33.6

-1

4.2

71.3

36.7

Major PPT

70.5

0.46

0.8

61.2

29.2

Minor 5ss

27.5

-2.6

26.4

37.1

Minor BPS

42.3

-0.5

3.6

72.74

44.7

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604