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Intron Name: Anas_platyrhynchos_platyrhynchos_13_17975788_17984796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17975788 - 17984796

Intron Length:

9009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

GAGTCATTCACG

Flanking Amino Acid:

SKSQPNPEPKRPDGIGTVTV

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

69.9

0.5

31.5

Major PPT

85.1

0.79

0.7

82.3

28.9

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

48.1

-0.2

2.1

54.71

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040013

17854056 - 18049169

195114

ENSAPLT00000023780

17854056 - 18049169

195114