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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1797891_1798361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1797891 - 1798361

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATTTATT

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTGTGTTTAATT

Flanking Amino Acid:

RAINRAKGLKHVVQCVFVAI

Intron Amino Acid Position:

1025

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

79.1

34.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

49.5

-0

2.5

68.9

35.5

Minor BPS

0.64

1.7

83.09

39.1

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604