Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_17989103_17989961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17989103 - 17989961

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CTCTTTCATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTCTCTTTCATA

Flanking Amino Acid:

LASQVMDLTIQNQKDAENVG

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.3

67.6

37.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

77.1

0.61

0.8

72.9

Minor 5ss

33.1

-1.9

2.6

38.9

32.7

Minor BPS

57.3

0.22

1.8

66.01

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021873

17854056 - 18049169

195114