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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1799682_1803014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1799682 - 1803014

Intron Length:

3333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGGT

5'SS Class:

major

3'SS Sequence:

ATTCTGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

AAACATGTAACA

Flanking Amino Acid:

SMFTFEIILKMTAFGAFLHK

Intron Amino Acid Position:

960

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

69.9

41.1

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

79.8

0.67

0.8

77.6

36.1

Minor 5ss

37.7

-1.4

3.5

56.6

47.5

Minor BPS

44.8

-0.4

2.1

54.56

37.3

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604