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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18004804_18014434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18004804 - 18014434

Intron Length:

9631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAC

U12 Branch Point Sequence:

CCGCTTATGACT

Flanking Amino Acid:

GFERESWEPVNNGSGTSEDL

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

77.7

Major BPS

74.7

0.62

1.1

65.7

Major PPT

69.4

0.44

61.9

39.9

Minor 5ss

33.3

-1.9

3.2

39.8

40.3

Minor BPS

45.7

-0.2

1.6

56.09

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040013

17854056 - 18049169

195114