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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18017641_18022729_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18017641 - 18022729

Intron Length:

5089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTCCTTTTATT

Flanking Amino Acid:

KLCSMEMGQEHQYHSKIDEL

Intron Amino Acid Position:

1160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

86.5

0.82

0.7

85.9

28.3

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

61.8

0.45

1.6

76.99

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021873

17854056 - 18049169

195114

ENSAPLT00000002342

17854056 - 18049169

195114

ENSAPLT00000040013

17854056 - 18049169

195114

ENSAPLT00000023780

17854056 - 18049169

195114