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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18022805_18023842_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18022805 - 18023842

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTTC

5'SS Class:

weak_major

3'SS Sequence:

TTTGTGTTCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

AATTACTAAAAA

Flanking Amino Acid:

KEMITLLVAKFVTILEGVLA

Intron Amino Acid Position:

1185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

73.2

39.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

77.3

0.61

0.9

72.4

37.8

Minor 5ss

63.9

0.47

2.4

76.5

39.2

Minor BPS

51.2

0.04

1.9

65.72

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040013

17854056 - 18049169

195114

ENSAPLT00000023780

17854056 - 18049169

195114

ENSAPLT00000021873

17854056 - 18049169

195114

ENSAPLT00000002342

17854056 - 18049169

195114