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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18023927_18028032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18023927 - 18028032

Intron Length:

4106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

GTTCCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

GTTCCTTTTACA

Flanking Amino Acid:

TLFSSFLSFTVKAASKYVDV

Intron Amino Acid Position:

1213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

85.6

0.8

79.7

32.4

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

64.1

0.44

1.6

73.8

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002342

17854056 - 18049169

195114

ENSAPLT00000040013

17854056 - 18049169

195114

ENSAPLT00000023780

17854056 - 18049169

195114

ENSAPLT00000021873

17854056 - 18049169

195114