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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18072106_18074756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18072106 - 18074756

Intron Length:

2651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAA

U12 Branch Point Sequence:

ATTAAGTTAAGC

Flanking Amino Acid:

LPHPDTVNLETLYWASVEES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

55.5

0.14

1.1

47.4

37.5

Major PPT

92.3

0.95

0.6

92.1

18.5

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

45.5

-0.3

2.4

62.52

42.6

Associated Gene:

Gene:

C3orf14

Ensembl Gene ID:

ENSAPLG00000013146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013686

18071872 - 18080311

8440