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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18074832_18079400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18074832 - 18079400

Intron Length:

4569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GCCTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTGTTTTTAAAT

Flanking Amino Acid:

ARKRNAALLNDIEAAEKKLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

84.3

27.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.3

0.41

64.8

41.3

Minor 5ss

47.2

-0.3

2.8

66.2

38.1

Minor BPS

66.9

0.61

1.4

77.3

39.2

Associated Gene:

Gene:

C3orf14

Ensembl Gene ID:

ENSAPLG00000013146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013686

18071872 - 18080311

8440