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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1808324_1809524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1808324 - 1809524

Intron Length:

1201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTAATTTAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATA

Flanking Amino Acid:

KDPYPPCDVPVGEDEEDEEE

Intron Amino Acid Position:

848

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

69.1

0.43

1.1

67.9

41.5

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

71.1

0.66

1.7

82.68

32.7

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604