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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18104244_18105493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18104244 - 18105493

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

ATTGAAATAACT

Flanking Amino Acid:

LMRPGVFTDIEQYQFLYKAM

Intron Amino Acid Position:

1375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

82.6

30.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

91.3

0.93

0.6

84.1

30.8

Minor 5ss

48.7

-0.1

2.8

73.2

37.2

Minor BPS

47.9

-0

2.1

74.03

Associated Gene:

Gene:

PTPRG

Ensembl Gene ID:

ENSAPLG00000012378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012980

18104097 - 18498871

394775