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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18109554_18111549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18109554 - 18111549

Intron Length:

1996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCGTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAG

U12 Branch Point Sequence:

GAGGCTGCAACA

Flanking Amino Acid:

IVMLPDNQSLAEDEFVYWPS

Intron Amino Acid Position:

1233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

49.4

-0

1.6

48.8

46.3

Major PPT

81.9

0.72

0.8

73.6

37.1

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

41.9

-0.6

2.1

49.06

41.9

Associated Gene:

Gene:

PTPRG

Ensembl Gene ID:

ENSAPLG00000012378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012980

18104097 - 18498871

394775