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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1812326_1814151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1812326 - 1814151

Intron Length:

1826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTGATATTG

Flanking Amino Acid:

FPQALLTVFQILTGEDWNAV

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

79.6

34.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

74.4

0.55

0.8

72.6

32.2

Minor 5ss

42.8

-0.8

3.2

61.1

43.8

Minor BPS

43.7

-0.6

2.4

59.33

43.1

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604