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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1814360_1814533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1814360 - 1814533

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CACATTTTAATT

Flanking Amino Acid:

VRLLRIFKVTRHWASLSNLV

Intron Amino Acid Position:

653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.8

77.6

35.5

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

57.3

0.31

1.3

64.56

40.8

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604