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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1814760_1815362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1814760 - 1815362

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTCA

5'SS Class:

major

3'SS Sequence:

TATTTTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

NQPDWLTQIQDIANKVLLAL

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

62.8

38.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.79

0.9

77.2

41.6

Minor 5ss

35.3

-1.7

3.5

47.9

47.7

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604