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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1825176_1828364_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1825176 - 1828364

Intron Length:

3189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTGTT

5'SS Class:

major

3'SS Sequence:

ATTTAACACGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

ATGTATTTAACA

Flanking Amino Acid:

EEVDEEGKRNRVTLADLMEE

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

70.4

40.2

Major BPS

79.5

0.73

0.9

36.9

Major PPT

55.4

0.12

1.1

54.9

Minor 5ss

39.7

-1.1

3.6

42.7

Minor BPS

68.9

0.59

1.4

74.64

36.8

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604