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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1828535_1838893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1828535 - 1838893

Intron Length:

10359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CTGAATTTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATCT

Flanking Amino Acid:

VLNLVLGVLSGEFSKEREKA

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.7

44.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

61.6

0.26

1.1

57.2

Minor 5ss

40.7

-1

2.9

49.5

46.5

Minor BPS

80.3

1.03

1.4

95.73

30.7

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604