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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1838998_1852024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1838998 - 1852024

Intron Length:

13027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

AGAATCATAACT

Flanking Amino Acid:

MEGWTDVLYWVNDAIGCEWP

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

76.2

39.9

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

82.1

0.72

0.9

37.6

Minor 5ss

35.6

-1.6

2.7

37.6

Minor BPS

54.5

0.22

1.7

70.06

39.9

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604