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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1852222_1853552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1852222 - 1853552

Intron Length:

1331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

GGTCAATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTCAAT

U12 Branch Point Sequence:

GGGGGGTCAATT

Flanking Amino Acid:

MHKSCFLIDSDILVEEDPAP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.1

1.09

0.7

Major BPS

47.6

-0.1

1.5

56.5

46.9

Major PPT

71.6

0.49

66.2

Minor 5ss

35.9

-1.6

49.5

46.7

Minor BPS

36.9

-0.9

2.4

49.08

44.5

Associated Gene:

Gene:

CACNA1D

Ensembl Gene ID:

ENSAPLG00000013574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014339

1737373 - 1928976

191604