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Intron Name: Anas_platyrhynchos_platyrhynchos_13_18878680_18887432_F

Intron Information:

Intron Rank:

150382

Intron Class:

major

Intron Phase:

Intron Coordinates:

18878680 - 18887432

Intron Length:

8753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACAG

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

ATAGCTTTAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

62.5

43.8

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

88.6

0.87

0.6

Minor 5ss

29.9

-2.3

3.3

37.9

Minor BPS

57.9

0.24

1.7

66.11

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025896

18878521 - 18899292

20772

ENSAPLT00000039261

18878521 - 18888230

9710