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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19371549_19373600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19371549 - 19373600

Intron Length:

2052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CACAGCATAATT

Flanking Amino Acid:

MQLPKETKQALGLIQQFLTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.3

66.9

40.1

Major BPS

76.9

0.67

66.3

40.4

Major PPT

84.1

0.77

0.8

77.1

37.1

Minor 5ss

35.5

-1.6

3.2

45.6

36.6

Minor BPS

44.9

-0.3

58.44

44.7

Associated Gene:

Gene:

C3orf67

Ensembl Gene ID:

ENSAPLG00000005403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005576

19369124 - 19430289

61166