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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19451749_19451921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19451749 - 19451921

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTTCTGATGACT

Flanking Amino Acid:

LVATYDDAATKMNGKIRKLF

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.54

0.7

72.6

25.6

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

45.4

-0.2

2.3

68.98

42.1

Associated Gene:

Gene:

FAM3D

Ensembl Gene ID:

ENSAPLG00000005464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005653

19448123 - 19452090

3968