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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19481479_19482485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19481479 - 19482485

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGTTGCTTTACA

Flanking Amino Acid:

AEHTRVRRAVVEVIERDPVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

83.1

0.75

0.9

76.3

37.8

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

61.2

0.35

2.1

76.35

40.5

Associated Gene:

Gene:

ACOX2

Ensembl Gene ID:

ENSAPLG00000005757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043378

19481311 - 19497077

15767

ENSAPLT00000006003

19481311 - 19497999

16689