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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19482649_19484922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19482649 - 19484922

Intron Length:

2274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCCTTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ATCAGTGTAAAA

Flanking Amino Acid:

EDGPEFIYIYRAVAGDVAFL

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.1

83.9

30.3

Major BPS

78.6

0.71

79.6

32.9

Major PPT

73.6

0.53

0.8

36.4

Minor 5ss

46.2

-0.4

2.8

66.9

44.4

Minor BPS

40.5

-0.7

2.3

51.06

40.7

Associated Gene:

Gene:

ACOX2

Ensembl Gene ID:

ENSAPLG00000005757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043378

19481311 - 19497077

15767

ENSAPLT00000006003

19481311 - 19497999

16689