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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19487472_19487880_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19487472 - 19487880

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

GACATCTAAAAT

Flanking Amino Acid:

RENMLNKFCEVQPDGTYIRR

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

77.1

37.8

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

76.2

0.59

0.8

68.7

37.2

Minor 5ss

42.1

-0.9

2.4

51.8

44.8

Minor BPS

47.1

-0.1

1.8

59.55

43.3

Associated Gene:

Gene:

ACOX2

Ensembl Gene ID:

ENSAPLG00000005757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043378

19481311 - 19497077

15767

ENSAPLT00000006003

19481311 - 19497999

16689