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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19488054_19489393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19488054 - 19489393

Intron Length:

1340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATGCCA

5'SS Class:

major

3'SS Sequence:

TGTCTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CTTTCCATACTT

Flanking Amino Acid:

AVRRQSKLNPGEEEAKILDY

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

42.8

Major BPS

84.8

0.86

85.7

34.9

Major PPT

74.9

0.56

0.9

70.3

35.1

Minor 5ss

30.7

-2.2

3.2

31.7

42.1

Minor BPS

59.4

0.37

1.9

80.51

41.8

Associated Gene:

Gene:

ACOX2

Ensembl Gene ID:

ENSAPLG00000005757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043378

19481311 - 19497077

15767

ENSAPLT00000006003

19481311 - 19497999

16689